Not sure I understand the question completely and what you are expecting when you say you would like a tool.
Have you looked at https://d3js.org/ and would it fit your definition of tool? Can you provide maybe some tools you've looked into but don't give you what you want?
A lot of tools like omnigraffle, visio, or yed will do that if you are able to output your data in their format. the data translation can be a fair bit of work, so for a one off project I'd agree with @Bobino and suggest the D3 javascript library.
The syntax is quite easy to adopt. You can map your FileMaker Data to strings in the GraphViz Language. And then display the graph either with the GraphViz App on any OS. Or you put it into a WebViewer with the help of a given JavaScript Lib.
There are plenty of open source libraries with implementations: http://viz-js.com
(sorry cannot post further links here due to restrictions of the forum software, I'll try another post to follow up)